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26 tools found in: Neuroimaging

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Name	Rating	Modification Date	Maturity	Downloads	Image
3D Slicer		Jun 11, 2010
1164 downloads An extensible, cross-platform, totally open research platform for image computing.
Allen Brain Atlas API		Jan 16, 2009	Stable
2D and 3D Programmatic Access to the ABA Mouse Brain Project..
Atlas3D		Nov 28, 2008	Intermediate
415 downloads Atlas3D is a multiplatform visualization tool which allows import and visualization of 3D atlas structures in combination with tomographic image data.
Axonal Beading and Microtubule Quantification		Aug 26, 2010	Experimental
9 downloads Interactive image analysis software for quantifying axonal beading morphology and focal microtubule loss using phase and fluorescent images a neuron.
BrainSuite2		Jul 14, 2008	Stable
277 downloads BrainSuite2 is used for cortical surface extraction..
BSMART		Nov 03, 2008	Stable
277 downloads A Matlab/C toolbox for Analyzing Brain Circuits..
FastICA		Jul 28, 2008	Stable
The standard software for independent component analysis (ICA).
Fiji		May 25, 2010	Stable
Fiji is an image processing package based on ImageJ.
Free-D		Mar 17, 2010	Intermediate
331 downloads 3D reconstruction, spatial normalization, and quantification of neuroanatomical structures from image stacks (histological, confocal, MRI, etc.)..
FreeSurfer		Apr 19, 2010
FreeSurfer is a set of automated tools for reconstruction of the brain’s cortical surface from structural MRI data, and overlay of functional MRI data onto the reconstructed surface.

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